Sovella

So I've recently come back to play PRO and saw about having to merge the accounts due to new servers. Basically what happened was after I merged my account my progress on the map was reset entirely but I still kept my Pokemon of course. I go through the beginning but I'm trapped in Pallet Town because the Eevee that's needed to trigger the cutscene is gone. I guess what I'm getting at is that it reset my progress without resetting the map I feel. Could I possibly just have my progress reset entirely or something to fix this? All my other friends play on Silver Server and would hate to lose this account and make a new one because of this.